Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse007G0158000
View in Genome Browser
Position
GWHBECT00000007:38747705-38753080 (+)
5375bp
Gene Type
gene
Gene Description (Protein Product)
transposition; RNA-mediated
Organism
Acer pseudosieboldianum
Also AS AT3G08800

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse008G0024800 Integrator complex subunit
gene-Apse011G0038800 transcription factor
gene-Apse008G0081800 transcription factor
Regulatory gene
gene-Apse002G0042400 dof zinc finger protein
gene-Apse003G0124100 Cyclic dof factor
gene-Apse004G0070400 dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003002 regionalization BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009956 radial pattern formation BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0010496 intercellular transport BP
GO:0012505 endomembrane system CC
GO:0016070 RNA metabolic process BP
GO:0016073 snRNA metabolic process BP
GO:0016180 snRNA processing BP
GO:0022622 root system development BP
GO:0031123 RNA 3'-end processing BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034470 ncRNA processing BP
GO:0034472 snRNA 3'-end processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043628 regulatory ncRNA 3'-end processing BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048364 root development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0071704 organic substance metabolic process BP
GO:0090057 root radial pattern formation BP
GO:0090304 nucleic acid metabolic process BP
GO:0097708 intracellular vesicle CC
GO:0099402 plant organ development BP
GO:1901360 organic cyclic compound metabolic process BP