Basic Information
Gene ID
gene-Apse008G0166500
Position
GWHBECT00000008:40329277-40332929 (-)
3652bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin-like superfamily protein
Organism
Also AS AT1G68185

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse010G0068200 Ubiquitin-conjugating enzyme E2; catalytic domain homologues
gene-Apse009G0205500 Small ubiquitin-related modifier
gene-Apse011G0188200 Nicotinate-nucleotide pyrophosphorylase carboxylating
Regulatory gene
gene-Apse002G0042400 dof zinc finger protein
gene-Apse002G0199400 Agamous-like MADS-box protein
gene-Apse002G0240000 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.