Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse009G0075200
View in Genome Browser
Position
GWHBECT00000009:25601865-25606712 (+)
4847bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Acer pseudosieboldianum
Also AS AT5G46860

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse011G0180600 Vesicle transport v-SNARE
gene-Apse012G0194300 Belongs to the syntaxin family
gene-Apse012G0181400 Alpha-soluble nsf attachment protein
Regulatory gene
gene-Apse001G0192500 AP2-like ethylene-responsive transcription factor
gene-Apse001G0272400 Transcription factor
gene-Apse002G0042400 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0005484 SNAP receptor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009657 plastid organization BP
GO:0009660 amyloplast organization BP
GO:0009705 plant-type vacuole membrane CC
GO:0009959 negative gravitropism BP
GO:0009987 cellular process BP
GO:0010118 stomatal movement BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0031090 organelle membrane CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090174 organelle membrane fusion BP
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0140056 organelle localization by membrane tethering BP
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04130 SNARE interactions in vesicular transport -