Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
ACSA_06643.g
View in Genome Browser
Position
acsa_004:59541784-59542251 (-)
467bp
Gene Type
gene
Gene Description (Protein Product)
tuftelin-interacting protein
Organism
Acer saccharum
Also AS AT1G17070

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
ACSA_02340.g dof zinc finger protein
ACSA_08378.g dof zinc finger protein
ACSA_08430.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000228 nuclear chromosome CC
GO:0000375 RNA splicing, via transesterification reactions BP
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile BP
GO:0000390 spliceosomal complex disassembly BP
GO:0000398 mRNA splicing, via spliceosome BP
GO:0000781 chromosome, telomeric region CC
GO:0000784 chromosome, telomeric region CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005681 spliceosomal complex CC
GO:0005684 U2-type spliceosomal complex CC
GO:0005694 chromosome CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006397 mRNA processing BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008380 RNA splicing BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016043 cellular component organization BP
GO:0016070 RNA metabolic process BP
GO:0016071 mRNA metabolic process BP
GO:0016604 nuclear body CC
GO:0016607 nuclear speck CC
GO:0022411 cellular component disassembly BP
GO:0030154 cell differentiation BP
GO:0030198 extracellular matrix organization BP
GO:0031012 extracellular matrix CC
GO:0031333 negative regulation of protein-containing complex assembly BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032091 negative regulation of protein binding BP
GO:0032502 developmental process BP
GO:0032984 protein-containing complex disassembly BP
GO:0032988 ribonucleoprotein complex disassembly BP
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042752 regulation of circadian rhythm BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043062 extracellular structure organization BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043393 regulation of protein binding BP
GO:0043933 protein-containing complex organization BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044092 negative regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044421 obsolete extracellular region part CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0046483 heterocycle metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051098 regulation of binding BP
GO:0051100 negative regulation of binding BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070990 snRNP binding MF
GO:0071008 U2-type post-mRNA release spliceosomal complex CC
GO:0071013 catalytic step 2 spliceosome CC
GO:0071014 post-mRNA release spliceosomal complex CC
GO:0071704 organic substance metabolic process BP
GO:0071826 ribonucleoprotein complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0098687 chromosomal region CC
GO:1901360 organic cyclic compound metabolic process BP
GO:1902494 catalytic complex CC
GO:1990446 U1 snRNP binding MF
GO:1990904 ribonucleoprotein complex CC