Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
ACSA_07188.g
View in Genome Browser
Position
acsa_003:58377924-58378265 (+)
341bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitin-related modifier
Organism
Acer saccharum
Also AS AT5G55160

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACSA_31737.g Belongs to the ubiquitin-conjugating enzyme family
ACSA_33580.g Ubiquitin-conjugating enzyme E2, catalytic domain homologues
ACSA_25747.g This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
Regulatory gene
ACSA_01443.g Zinc finger, C2H2 type family protein
ACSA_02340.g dof zinc finger protein
ACSA_07388.g Zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.