PPGR - Gene Detail

Basic Information

Gene ID	ACSA_21448.g View in Genome Browser
Position	acsa_387:3299937-3301920 (+) 1983bp
Gene Type	gene
Gene Description (Protein Product)	Alpha-ketoglutarate-dependent dioxygenase
Organism	Acer saccharum
Also AS	AT1G11780

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

ACSA_28437.g cytochrome P450

ACSA_24673.g Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)

ACSA_23029.g High mobility group B protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000228	nuclear chromosome	CC
GO:0000785	chromatin	CC
GO:0000790	chromatin	CC
GO:0000791	euchromatin	CC
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005506	iron ion binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005719	euchromatin	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006281	DNA repair	BP
GO:0006304	DNA modification	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006974	cellular response to DNA damage stimulus	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008198	ferrous iron binding	MF
GO:0009987	cellular process	BP
GO:0016070	RNA metabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0016706	2-oxoglutarate-dependent dioxygenase activity	MF
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0033554	cellular response to stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0035510	DNA dealkylation	BP
GO:0035511	obsolete oxidative DNA demethylation	BP
GO:0035552	oxidative single-stranded DNA demethylation	BP
GO:0042245	RNA repair	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043412	macromolecule modification	BP
GO:0043734	DNA-N1-methyladenine dioxygenase activity	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044454	obsolete nuclear chromosome part	CC
GO:0044464	obsolete cell part	CC
GO:0044728	obsolete DNA methylation or demethylation	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0050896	response to stimulus	BP
GO:0051213	dioxygenase activity	MF
GO:0051716	cellular response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070579	methylcytosine dioxygenase activity	MF
GO:0070988	demethylation	BP
GO:0070989	oxidative demethylation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080111	DNA demethylation	BP
GO:0090304	nucleic acid metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP