PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	ACSA_28011.g View in Genome Browser
Position	acsa_387:13927469-13941193 (-) 13724bp
Gene Type	gene
Gene Description (Protein Product)	SNF2 domain-containing protein helicase domain-containing protein
Organism	Acer saccharum
Also AS	AT1G50410

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

ACSA_38522.g Histone-lysine n-methyltransferase

ACSA_28680.g Belongs to the argonaute family

ACSA_34466.g Chromatin structure-remodeling complex protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000228	nuclear chromosome	CC
GO:0000278	mitotic cell cycle	BP
GO:0000724	double-strand break repair via homologous recombination	BP
GO:0000725	recombinational repair	BP
GO:0000785	chromatin	CC
GO:0000790	chromatin	CC
GO:0003674	molecular_function	MF
GO:0003678	DNA helicase activity	MF
GO:0003824	catalytic activity	MF
GO:0004003	DNA helicase activity	MF
GO:0004386	helicase activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005737	cytoplasm	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006260	DNA replication	BP
GO:0006261	DNA-templated DNA replication	BP
GO:0006281	DNA repair	BP
GO:0006302	double-strand break repair	BP
GO:0006310	DNA recombination	BP
GO:0006464	protein modification process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006974	cellular response to DNA damage stimulus	BP
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007154	cell communication	BP
GO:0008026	helicase activity	MF
GO:0008094	ATP-dependent activity, acting on DNA	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008270	zinc ion binding	MF
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009605	response to external stimulus	BP
GO:0009892	negative regulation of metabolic process	BP
GO:0009894	regulation of catabolic process	BP
GO:0009895	negative regulation of catabolic process	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0010605	negative regulation of macromolecule metabolic process	BP
GO:0016043	cellular component organization	BP
GO:0016462	pyrophosphatase activity	MF
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016817	hydrolase activity, acting on acid anhydrides	MF
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	MF
GO:0016887	ATP hydrolysis activity	MF
GO:0017111	ribonucleoside triphosphate phosphatase activity	MF
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0022402	cell cycle process	BP
GO:0030162	regulation of proteolysis	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031324	negative regulation of cellular metabolic process	BP
GO:0031329	regulation of cellular catabolic process	BP
GO:0031330	negative regulation of cellular catabolic process	BP
GO:0031668	cellular response to extracellular stimulus	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032268	regulation of protein metabolic process	BP
GO:0032269	negative regulation of protein metabolic process	BP
GO:0032392	DNA geometric change	BP
GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	BP
GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	BP
GO:0032446	protein modification by small protein conjugation	BP
GO:0032508	DNA duplex unwinding	BP
GO:0033260	nuclear DNA replication	BP
GO:0033554	cellular response to stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0036211	protein modification process	BP
GO:0042176	regulation of protein catabolic process	BP
GO:0042177	negative regulation of protein catabolic process	BP
GO:0042262	DNA protection	BP
GO:0042623	ATP hydrolysis activity	MF
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044454	obsolete nuclear chromosome part	CC
GO:0044464	obsolete cell part	CC
GO:0044786	cell cycle DNA replication	BP
GO:0045005	DNA-templated DNA replication maintenance of fidelity	BP
GO:0045861	negative regulation of proteolysis	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051172	negative regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051248	negative regulation of protein metabolic process	BP
GO:0051276	chromosome organization	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061136	regulation of proteasomal protein catabolic process	BP
GO:0061630	ubiquitin protein ligase activity	MF
GO:0061659	ubiquitin-like protein ligase activity	MF
GO:0065007	biological regulation	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070035	obsolete purine NTP-dependent helicase activity	MF
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071103	DNA conformation change	BP
GO:0071496	cellular response to external stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0140083	ATP-dependent protein-DNA unloader activity	MF
GO:0140096	catalytic activity, acting on a protein	MF
GO:0140097	catalytic activity, acting on DNA	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901799	negative regulation of proteasomal protein catabolic process	BP
GO:1902298	cell cycle DNA replication maintenance of fidelity	BP
GO:1902969	mitotic DNA replication	BP
GO:1903047	mitotic cell cycle process	BP
GO:1903050	regulation of proteolysis involved in protein catabolic process	BP
GO:1903051	negative regulation of proteolysis involved in protein catabolic process	BP
GO:1903362	regulation of protein catabolic process	BP
GO:1903363	negative regulation of protein catabolic process	BP
GO:1990505	mitotic DNA replication maintenance of fidelity	BP
GO:2000058	regulation of ubiquitin-dependent protein catabolic process	BP
GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	BP