Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
ACSA_33930.g
View in Genome Browser
Position
acsa_004:68275540-68279083 (-)
3543bp
Gene Type
gene
Gene Description (Protein Product)
Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)
Organism
Acer saccharum
Also AS AT1G14790

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
ACSA_02340.g dof zinc finger protein
ACSA_05804.g B3 domain-containing transcription factor
ACSA_08378.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009751 response to salicylic acid BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010025 wax biosynthetic process BP
GO:0010033 response to organic substance BP
GO:0010166 wax metabolic process BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010608 post-transcriptional regulation of gene expression BP
GO:0010629 negative regulation of gene expression BP
GO:0014070 response to organic cyclic compound BP
GO:0016070 RNA metabolic process BP
GO:0016246 RNA-mediated post-transcriptional gene silencing BP
GO:0016441 post-transcriptional gene silencing BP
GO:0016458 obsolete gene silencing BP
GO:0019222 regulation of metabolic process BP
GO:0030422 siRNA processing BP
GO:0031047 RNA-mediated gene silencing BP
GO:0031050 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035194 RNA-mediated post-transcriptional gene silencing BP
GO:0040029 epigenetic regulation of gene expression BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043331 response to dsRNA BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0060147 regulation of post-transcriptional gene silencing BP
GO:0060148 positive regulation of post-transcriptional gene silencing BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060968 obsolete regulation of gene silencing BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0070918 regulatory ncRNA processing BP
GO:0071310 cellular response to organic substance BP
GO:0071359 cellular response to dsRNA BP
GO:0071407 cellular response to organic cyclic compound BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901568 fatty acid derivative metabolic process BP
GO:1901570 fatty acid derivative biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901698 response to nitrogen compound BP
GO:1901699 cellular response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP