Basic Information
Gene ID
Position
acsa_001:3834992-3838457 (+)
3465bp
Gene Type
gene
Gene Description (Protein Product)
Tudor PWWP MBT superfamily protein
Organism
Also AS AT5G27650

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
ACSA_39707.g 1-aminocyclopropane-1-carboxylate synthase
ACSA_35846.g Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
ACSA_35654.g Tyrosyl-DNA phosphodiesterase
Regulatory gene
ACSA_08768.g MADS-box protein
ACSA_09040.g MADS-box protein
ACSA_12155.g Agamous-like MADS-box protein AGL12

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].