PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	ACSA_36780.g View in Genome Browser
Position	acsa_382:15683122-15694058 (-) 10936bp
Gene Type	gene
Gene Description (Protein Product)	exonuclease
Organism	Acer saccharum
Also AS	AT1G18090

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	ACSA_38478.g dna polymerase delta small ACSA_39458.g Replication factor C subunit ACSA_39406.g Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP
Regulatory gene	ACSA_02340.g dof zinc finger protein ACSA_08378.g dof zinc finger protein ACSA_08430.g dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map03430	Mismatch repair	DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.