Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Atru.chr2.2841.g
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Position
chr2:46122359-46125619 (-)
3260bp
Gene Type
gene
Gene Description (Protein Product)
Lysine-specific histone demethylase 1 homolog
Organism
Acer truncatum
Also AS AT3G13682

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Atru.chr9.2555.g Belongs to the histone deacetylase family. HD Type 1 subfamily
Atru.chr3.3346.g Belongs to the histone deacetylase family. HD Type 1 subfamily
Atru.chr9.430.g histone deacetylase
Regulatory gene
Atru.chr1.1136.g Agamous-like MADS-box protein
Atru.chr1.1799.g Myb-like DNA-binding domain
Atru.chr1.2813.g AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006479 protein methylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008213 protein alkylation BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016571 histone methylation BP
GO:0018022 peptidyl-lysine methylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0019538 protein metabolic process BP
GO:0032259 methylation BP
GO:0034968 histone lysine methylation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043414 macromolecule methylation BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0051276 chromosome organization BP
GO:0051568 histone H3-K4 methylation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901564 organonitrogen compound metabolic process BP