PPGR - Gene Detail

Basic Information

Gene ID	Atru.chr3.4197.g View in Genome Browser
Position	chr3:66148293-66150815 (+) 2522bp
Gene Type	gene
Gene Description (Protein Product)	omega-3 fatty acid desaturase
Organism	Acer truncatum
Also AS	AT5G05580

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Atru.chr8.1106.g Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme

Atru.chr7.108.g Omega-6 fatty acid desaturase

Atru.chr6.1525.g Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids

Regulatory gene

Atru.chr1.1136.g Agamous-like MADS-box protein

Atru.chr1.3656.g dof zinc finger protein

Atru.chr1.556.g MADS-box protein SOC1-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006633	fatty acid biosynthetic process	BP
GO:0006636	unsaturated fatty acid biosynthetic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016053	organic acid biosynthetic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0031984	organelle subcompartment	CC
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0033559	unsaturated fatty acid metabolic process	BP
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0042389	omega-3 fatty acid desaturase activity	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0050896	response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0080167	response to karrikin	BP
GO:0098827	endoplasmic reticulum subcompartment	CC
GO:1901576	organic substance biosynthetic process	BP