Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Atru.chr5.3390.g
View in Genome Browser
Position
chr5:46434561-46437459 (-)
2898bp
Gene Type
gene
Gene Description (Protein Product)
"Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2)
Organism
Acer truncatum
Also AS AT3G02360

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Atru.chr6.2534.2.g Ribulose-phosphate 3-epimerase
Atru.chr9.179.g Ribulose-phosphate 3-epimerase
Atru.chr8.2543.g mediator of RNA polymerase II transcription subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008037 cell recognition BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009566 fertilization BP
GO:0009567 double fertilization forming a zygote and endosperm BP
GO:0009570 chloroplast stroma CC
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009987 cellular process BP
GO:0009988 cell-cell recognition BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0016043 cellular component organization BP
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MF
GO:0019822 P4 peroxisome CC
GO:0019953 sexual reproduction BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032504 multicellular organism reproduction BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0042579 microbody CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0045026 plasma membrane fusion BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061936 fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080173 male-female gamete recognition during double fertilization forming a zygote and endosperm BP
GO:0097305 response to alcohol BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00480 Glutathione metabolism -
map00030 Pentose phosphate pathway The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].