Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Atru.chr5.848.g
View in Genome Browser
Position
chr5:8306140-8309681 (+)
3541bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the SNF7 family
Organism
Acer truncatum
Also AS AT3G62080

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Atru.chr7.1513.g Belongs to the SNF7 family
Atru.chr7.1664.g Belongs to the SNF7 family
Atru.chr8.461.2.g Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
Regulatory gene
Atru.chr1.1577.g NAC transcription factor
Atru.chr1.2.g NAC domain-containing protein
Atru.chr1.2134.g NAC domain-containing protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000815 ESCRT III complex CC
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005635 nuclear envelope CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0006810 transport BP
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0006998 nuclear envelope organization BP
GO:0007034 vacuolar transport BP
GO:0007049 cell cycle BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008565 obsolete protein transporter activity MF
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010256 endomembrane system organization BP
GO:0010458 exit from mitosis BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022402 cell cycle process BP
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031468 nuclear membrane reassembly BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0031982 vesicle CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0036452 ESCRT complex CC
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044428 obsolete nuclear part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0045184 establishment of protein localization BP
GO:0045324 late endosome to vacuole transport BP
GO:0046907 intracellular transport BP
GO:0048285 organelle fission BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0061024 membrane organization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0140014 mitotic nuclear division BP
GO:1903047 mitotic cell cycle process BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.