PPGR - Gene Detail

Basic Information

Gene ID	Atru.chr6.2579.g View in Genome Browser
Position	chr6:36336794-36337917 (+) 1123bp
Gene Type	gene
Gene Description (Protein Product)	50S ribosomal protein L27
Organism	Acer truncatum
Also AS	AT5G40950

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Atru.chr7.353.g Belongs to the bacterial ribosomal protein bL35 family

Atru.chr8.947.g Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit

Atru.chr9.2421.g 39S ribosomal protein L47

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003735	structural constituent of ribosome	MF
GO:0005198	structural molecule activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0008150	biological_process	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009735	response to cytokinin	BP
GO:0009941	chloroplast envelope	CC
GO:0010033	response to organic substance	BP
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0042221	response to chemical	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP

KEGG Term	Name	Description
map03010	Ribosome	-