Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Atru.chr9.169.g
View in Genome Browser
Position
chr9:4252642-4252947 (-)
305bp
Gene Type
gene
Gene Description (Protein Product)
histone H3
Organism
Acer truncatum
Also AS AT5G10980

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Atru.chr9.2555.g Belongs to the histone deacetylase family. HD Type 1 subfamily
Atru.chr9.1815.g Belongs to the actin family
Atru.chr9.2059.g Belongs to the ubiquitin-conjugating enzyme family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000070 mitotic sister chromatid segregation BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000775 chromosome, centromeric region CC
GO:0000776 kinetochore CC
GO:0000785 chromatin CC
GO:0000786 nucleosome CC
GO:0000819 sister chromatid segregation BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003682 chromatin binding MF
GO:0003690 double-stranded DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0006323 chromosome organization BP
GO:0006325 chromatin organization BP
GO:0006333 chromatin organization BP
GO:0006334 nucleosome assembly BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0008150 biological_process BP
GO:0009555 pollen development BP
GO:0009566 fertilization BP
GO:0009567 double fertilization forming a zygote and endosperm BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0019237 centromeric DNA binding MF
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030154 cell differentiation BP
GO:0031490 chromatin DNA binding MF
GO:0031491 nucleosome binding MF
GO:0031492 nucleosomal DNA binding MF
GO:0031497 chromatin organization BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032991 protein-containing complex CC
GO:0032993 protein-DNA complex CC
GO:0034508 centromere complex assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0034728 nucleosome organization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044815 DNA packaging complex CC
GO:0044877 protein-containing complex binding MF
GO:0048229 gametophyte development BP
GO:0048232 male gamete generation BP
GO:0048235 pollen sperm cell differentiation BP
GO:0048285 organelle fission BP
GO:0048555 generative cell nucleus CC
GO:0048609 multicellular organismal reproductive process BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051276 chromosome organization BP
GO:0051382 kinetochore assembly BP
GO:0051383 kinetochore organization BP
GO:0051704 obsolete multi-organism process BP
GO:0055046 microgametogenesis BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0070925 organelle assembly BP
GO:0071103 DNA conformation change BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:0098687 chromosomal region CC
GO:0098813 nuclear chromosome segregation BP
GO:0140014 mitotic nuclear division BP
GO:1901363 heterocyclic compound binding MF
GO:1903047 mitotic cell cycle process BP
GO:1990837 sequence-specific double-stranded DNA binding MF