PPGR - Gene Detail

Basic Information

Gene ID	gene-EZV62_015961 View in Genome Browser
Position	CM017767.1:33535833-33537035 (-) 1202bp
Gene Type	gene
Gene Description (Protein Product)	RING-type E3 ubiquitin transferase
Organism	Acer yangbiense
Also AS	AT3G52450

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-EZV62_023237 26S proteasome non-ATPase regulatory subunit

gene-EZV62_023615 -

gene-EZV62_016356 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

gene-EZV62_002580 Zinc finger protein

gene-EZV62_005372 Zinc finger AN1 and C2H2 domain-containing stress-associated protein

gene-EZV62_010782 Transcriptional regulator

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001101	response to acid chemical	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009414	response to water deprivation	BP
GO:0009415	response to water	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0010200	response to chitin	BP
GO:0010243	response to organonitrogen compound	BP
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0032446	protein modification by small protein conjugation	BP
GO:0036211	protein modification process	BP
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051865	protein autoubiquitination	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901698	response to nitrogen compound	BP
GO:1901700	response to oxygen-containing compound	BP