Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-CEY00_Acc00536
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Position
CM009654.1:7913908-7915684 (+)
1776bp
Gene Type
gene
Gene Description (Protein Product)
LOB domain-containing protein
Organism
Actinidia chinensis
Also AS AT3G49940CEY00_Acc00536

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-CEY00_Acc11099 Topless-related protein 3-like
gene-CEY00_Acc06590 Topless-related protein 3-like
gene-CEY00_Acc21432 Topless-related protein 3-like
Regulatory gene
gene-CEY00_Acc00248 zinc finger binding to DNA consensus sequence [AT]GATA[AG]
gene-CEY00_Acc00457 Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
gene-CEY00_Acc00874 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Target gene
gene-CEY00_Acc00095 LURP-one-related
gene-CEY00_Acc00121 Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
gene-CEY00_Acc00122 Histone-lysine n-methyltransferase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009965 leaf morphogenesis BP
GO:0010016 shoot system morphogenesis BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0060776 simple leaf morphogenesis BP
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP