Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-CEY00_Acc11038
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Position
CM009663.1:2377719-2398271 (+)
20552bp
Gene Type
gene
Gene Description (Protein Product)
helicase MAGATAMA
Organism
Actinidia chinensis
Also AS AT4G15570CEY00_Acc11038

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-CEY00_Acc21284 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
gene-CEY00_Acc18824 Belongs to the DEAD box helicase family
gene-CEY00_Acc17091 116 kDa U5 small nuclear ribonucleoprotein
Regulatory gene
gene-CEY00_Acc00248 zinc finger binding to DNA consensus sequence [AT]GATA[AG]
gene-CEY00_Acc00457 Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
gene-CEY00_Acc00996 GATA transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0006935 chemotaxis BP
GO:0007154 cell communication BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009553 embryo sac development BP
GO:0009605 response to external stimulus BP
GO:0009856 pollination BP
GO:0009875 pollen-pistil interaction BP
GO:0009987 cellular process BP
GO:0010183 pollen tube guidance BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040011 locomotion BP
GO:0042221 response to chemical BP
GO:0042330 taxis BP
GO:0044706 multi-multicellular organism process BP
GO:0048229 gametophyte development BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0050896 response to stimulus BP
GO:0050918 positive chemotaxis BP
GO:0051704 obsolete multi-organism process BP