Basic Information
Gene ID
gene-CEY00_Acc19818
Position
CM009671.1:1314867-1319543 (+)
4676bp
Gene Type
gene
Gene Description (Protein Product)
Large family of predicted nucleotide-binding domains
Organism
Also AS AT2G46230CEY00_Acc19818

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-CEY00_Acc20236 mediator of RNA polymerase II transcription subunit
gene-CEY00_Acc25592 U3 small nucleolar RNA-associated protein 18 homolog
gene-CEY00_Acc20473 WD repeat-containing protein
Regulatory gene
gene-CEY00_Acc01060 Protein BASIC PENTACYSTEINE6-like
gene-CEY00_Acc04579 Protein BASIC PENTACYSTEINE6-like
gene-CEY00_Acc05201 GAGA binding protein-like family

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.