PPGR - Gene Detail

Basic Information

Gene ID	gene-CEY00_Acc22716 View in Genome Browser
Position	CM009673.1:5209817-5220011 (+) 10194bp
Gene Type	gene
Gene Description (Protein Product)	MIP18 family protein At1g68310-like
Organism	Actinidia chinensis
Also AS	AT1G68310CEY00_Acc22716

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-CEY00_Acc31694 DNA repair helicase

gene-CEY00_Acc30560 Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development

gene-CEY00_Acc30068 DNA polymerase epsilon catalytic subunit

Regulatory gene

gene-CEY00_Acc00027 Floral homeotic protein

gene-CEY00_Acc00082 B3 domain-containing

gene-CEY00_Acc00495 MADS-box transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003002	regionalization	BP
GO:0003674	molecular_function	MF
GO:0005048	signal sequence binding	MF
GO:0005488	binding	MF
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006310	DNA recombination	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009798	axis specification	BP
GO:0009943	adaxial/abaxial axis specification	BP
GO:0009944	polarity specification of adaxial/abaxial axis	BP
GO:0009955	adaxial/abaxial pattern specification	BP
GO:0009987	cellular process	BP
GO:0010209	vacuolar sorting signal binding	MF
GO:0016043	cellular component organization	BP
GO:0016226	iron-sulfur cluster assembly	BP
GO:0022607	cellular component assembly	BP
GO:0031163	metallo-sulfur cluster assembly	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0033218	amide binding	MF
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042127	regulation of cell population proliferation	BP
GO:0042277	peptide binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051726	regulation of cell cycle	BP
GO:0065001	specification of axis polarity	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080134	regulation of response to stress	BP
GO:0080135	regulation of cellular response to stress	BP
GO:0090304	nucleic acid metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1990067	intrachromosomal DNA recombination	BP
GO:2001020	regulation of response to DNA damage stimulus	BP
GO:2001022	positive regulation of response to DNA damage stimulus	BP