Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00001.121.v1.0.g
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Position
AmTr_scaff00001:2044476-2046282 (+)
1806bp
Gene Type
gene
Gene Description (Protein Product)
DNL zinc finger
Organism
Amborella trichopoda
Also AS AT5G27280AMTR_s00001p00142230

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00046.170.v1.0.g Belongs to the heat shock protein 70 family
AmTr_scaff00022.111.v1.0.g Belongs to the heat shock protein 70 family
AmTr_scaff00071.92.v1.0.g Belongs to the heat shock protein 70 family
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.163.v1.0.g two-component response regulator
AmTr_scaff00002.171.v1.0.g GATA transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006457 protein folding BP
GO:0006605 protein targeting BP
GO:0006626 protein targeting to mitochondrion BP
GO:0006810 transport BP
GO:0006839 mitochondrial transport BP
GO:0006886 intracellular protein transport BP
GO:0006950 response to stress BP
GO:0006986 response to unfolded protein BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016043 cellular component organization BP
GO:0017038 protein import BP
GO:0030150 protein import into mitochondrial matrix BP
GO:0031647 regulation of protein stability BP
GO:0031974 membrane-enclosed lumen CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0035966 response to topologically incorrect protein BP
GO:0042221 response to chemical BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044743 protein transmembrane import into intracellular organelle BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0050821 protein stabilization BP
GO:0050896 response to stimulus BP
GO:0051087 chaperone binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055085 transmembrane transport BP
GO:0065002 intracellular protein transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0070585 protein localization to mitochondrion BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071806 protein transmembrane transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072655 establishment of protein localization to mitochondrion BP
GO:1990542 mitochondrial transmembrane transport BP