Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
AmTr_scaff00001.128.v1.0.g
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Position
AmTr_scaff00001:2142423-2146789 (+)
4366bp
Gene Type
gene
Gene Description (Protein Product)
Hippocampus abundant transcript-like protein
Organism
Amborella trichopoda
Also AS AT5G42210AMTR_s00001p00146610

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00014.45.v1.0.g Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism
AmTr_scaff00143.17.v1.0.g F-box-like WD repeat-containing protein
AmTr_scaff00120.36.v1.0.g Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.171.v1.0.g GATA transcription factor
AmTr_scaff00002.228.v1.0.g Homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail