Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00001.131.v1.0.g
View in Genome Browser
Position
AmTr_scaff00001:2189887-2208349 (+)
18462bp
Gene Type
gene
Gene Description (Protein Product)
Auxilin-related protein
Organism
Amborella trichopoda
Also AS AT4G12770AMTR_s00001p00148480

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00048.223.v1.0.g Encoded by
AmTr_scaff00051.56.v1.0.g Belongs to the ubiquitin-conjugating enzyme family
AmTr_scaff00138.19.v1.0.g THO complex subunit
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.171.v1.0.g GATA transcription factor
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0008150 biological_process BP
GO:0009504 cell plate CC
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0031982 vesicle CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0071944 cell periphery CC
GO:0072583 clathrin-dependent endocytosis BP
GO:0098657 import into cell BP