Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00001.225.v1.0.g
View in Genome Browser
Position
AmTr_scaff00001:4348140-4349431 (-)
1291bp
Gene Type
gene
Gene Description (Protein Product)
Floral homeotic protein
Organism
Amborella trichopoda
Also AS AT3G54340AMTR_s00001p00217560

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00047.105.v1.0.g transcription factor
AmTr_scaff00089.36.v1.0.g Floral homeotic protein
AmTr_scaff00013.53.v1.0.g MADS-box protein
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like
Target gene
AmTr_scaff00001.106.v1.0.g Neprosin
AmTr_scaff00001.118.v1.0.g DDB1- and CUL4-associated factor
AmTr_scaff00001.129.v1.0.g Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009908 flower development BP
GO:0010093 specification of floral organ identity BP
GO:0010097 specification of stamen identity BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048444 floral organ morphogenesis BP
GO:0048448 stamen morphogenesis BP
GO:0048449 floral organ formation BP
GO:0048455 stamen formation BP
GO:0048466 androecium development BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0090567 reproductive shoot system development BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0090701 specification of plant organ identity BP
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP