Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00003.102.v1.0.g
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Position
AmTr_scaff00003:1904201-1905221 (-)
1020bp
Gene Type
gene
Gene Description (Protein Product)
ethylene-responsive transcription factor
Organism
Amborella trichopoda
Also AS AT2G47520AMTR_s00003p00135920

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00012.148.v1.0.g E3 ubiquitin-protein ligase
AmTr_scaff00013.140.v1.0.g snf1-related protein kinase regulatory subunit
AmTr_scaff00040.290.v1.0.g Myb/SANT-like DNA-binding domain
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00010.496.v1.0.g Cyclic dof factor
Target gene
AmTr_scaff00001.132.v1.0.g -
AmTr_scaff00001.155.v1.0.g Pentatricopeptide repeat-containing protein At3g07290
AmTr_scaff00001.161.v1.0.g fructose-bisphosphate aldolase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009628 response to abiotic stimulus BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0034059 response to anoxia BP
GO:0036293 response to decreased oxygen levels BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070482 response to oxygen levels BP
GO:0080090 regulation of primary metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000280 regulation of root development BP
GO:2001141 regulation of RNA biosynthetic process BP