Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00004.258.v1.0.g
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Position
AmTr_scaff00004:7900858-7942044 (-)
41186bp
Gene Type
gene
Gene Description (Protein Product)
Zinc finger CCCH domain-containing protein
Organism
Amborella trichopoda
Also AS AT2G33835AMTR_s00004p00261980

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00016.361.v1.0.g Belongs to the Frigida family
AmTr_scaff00136.8.v1.0.g WD-40 repeat-containing protein
AmTr_scaff00040.306.v1.0.g Transcription initiation factor TFIID subunit
Regulatory gene
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00007.32.v1.0.g Zinc finger protein
Target gene
AmTr_scaff00001.178.v1.0.g tRNA pseudouridine synthase
AmTr_scaff00001.216.v1.0.g
AmTr_scaff00001.323.v1.0.g -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0008150 biological_process BP
GO:0010219 regulation of vernalization response BP
GO:0010220 positive regulation of vernalization response BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0065007 biological regulation BP
GO:0080134 regulation of response to stress BP