Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00006.271.v1.0.g
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Position
AmTr_scaff00006:8442393-8449984 (+)
7591bp
Gene Type
gene
Gene Description (Protein Product)
tryptophan synthase beta chain
Organism
Amborella trichopoda
Also AS AT5G38530AMTR_s00006p00265000

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00037.106.v1.0.g Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione
AmTr_scaff00239.4.v1.0.g serine acetyltransferase
AmTr_scaff00061.233.v1.0.g indole-3-glycerol phosphate synthase
Regulatory gene
AmTr_scaff00002.637.v1.0.g tesmin tso1-like cxc
AmTr_scaff00002.671.v1.0.g B3 domain-containing protein
AmTr_scaff00003.380.v1.0.g B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].