Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00009.394.v1.0.g
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Position
AmTr_scaff00009:8699039-8702732 (+)
3693bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the expansin family
Organism
Amborella trichopoda
Also AS AT4G28250AMTR_s00009p00266410

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00062.54.v1.0.g Belongs to the syntaxin family
AmTr_scaff00057.87.v1.0.g Belongs to the syntaxin family
AmTr_scaff00111.115.v1.0.g Belongs to the syntaxin family
Regulatory gene
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00007.32.v1.0.g Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0005911 cell-cell junction CC
GO:0006949 syncytium formation BP
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0032502 developmental process BP
GO:0044464 obsolete cell part CC
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0055044 symplast CC
GO:0071944 cell periphery CC