Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00011.170.v1.0.g
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Position
AmTr_scaff00011:6924893-6925621 (+)
728bp
Gene Type
gene
Gene Description (Protein Product)
Zinc-finger homeodomain protein
Organism
Amborella trichopoda
Also AS AT1G14440AMTR_s00011p00255340

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00026.80.v1.0.g Homeobox protein knotted-1-like
AmTr_scaff00040.303.v1.0.g homeobox-leucine zipper protein
AmTr_scaff00099.132.v1.0.g Zinc-finger homeodomain protein
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00010.496.v1.0.g Cyclic dof factor
Target gene
AmTr_scaff00001.125.v1.0.g Serine threonine-protein phosphatase 7 long form homolog
AmTr_scaff00001.148.v1.0.g Flavin containing amine oxidoreductase
AmTr_scaff00001.16.v1.0.g Belongs to the actin family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF