Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00022.311.v1.0.g
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Position
AmTr_scaff00022:4968918-4970018 (+)
1100bp
Gene Type
gene
Gene Description (Protein Product)
DNA-damage-repair toleration protein
Organism
Amborella trichopoda
Also AS AT3G20820AMTR_s00022p00230910

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00149.69.v1.0.g Belongs to the adaptor complexes medium subunit family
AmTr_scaff00032.21.v1.0.g Rae1-like protein
AmTr_scaff00119.98.v1.0.g pre-mRNA-splicing factor SPF27 homolog
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00010.496.v1.0.g Cyclic dof factor
AmTr_scaff00012.109.v1.0.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0036094 small molecule binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097159 organic cyclic compound binding MF
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF