Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00024.104.v1.0.g
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Position
AmTr_scaff00024:2260026-2270997 (+)
10971bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the group II decarboxylase family
Organism
Amborella trichopoda
Also AS AT5G17330AMTR_s00024p00151670

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00024.92.v1.0.g Belongs to the group II decarboxylase family
AmTr_scaff00024.94.v1.0.g Belongs to the group II decarboxylase family
AmTr_scaff00037.152.v1.0.g The glycine cleavage system catalyzes the degradation of glycine
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00010.496.v1.0.g Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0030054 cell junction CC
GO:0055044 symplast CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00650 Butanoate metabolism -
map00430 Taurine and hypotaurine metabolism -
map00410 beta-Alanine metabolism -
map00250 Alanine, aspartate and glutamate metabolism -