Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00024.206.v1.0.g
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Position
AmTr_scaff00024:4341160-4347237 (+)
6077bp
Gene Type
gene
Gene Description (Protein Product)
Mechanosensitive ion channel protein
Organism
Amborella trichopoda
Also AS AT5G12080AMTR_s00024p00217410

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00073.30.v1.0.g belongs to the protein kinase superfamily
AmTr_scaff00033.247.v1.0.g Mechanosensitive ion channel protein
AmTr_scaff00152.28.v1.0.g Protein MID1-COMPLEMENTING ACTIVITY
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00010.496.v1.0.g Cyclic dof factor
AmTr_scaff00012.109.v1.0.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0008219 cell death BP
GO:0008381 mechanosensitive monoatomic ion channel activity MF
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009605 response to external stimulus BP
GO:0009612 response to mechanical stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010150 leaf senescence BP
GO:0012501 programmed cell death BP
GO:0015267 channel activity MF
GO:0016020 membrane CC
GO:0022803 passive transmembrane transporter activity MF
GO:0022836 gated channel activity MF
GO:0022857 transmembrane transporter activity MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0036473 cell death in response to oxidative stress BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0050982 detection of mechanical stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071944 cell periphery CC
GO:0080167 response to karrikin BP
GO:0090693 plant organ senescence BP
GO:0097468 programmed cell death in response to reactive oxygen species BP
GO:0099402 plant organ development BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP