Basic Information
Gene ID
AmTr_scaff00025.304.v1.0.g
Position
AmTr_scaff00025:4396681-4397695 (+)
1014bp
Gene Type
gene
Gene Description (Protein Product)
3-ketoacyl-coa synthase
Organism
Also AS AT1G68530AMTR_s00025p00218830

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00044.74.v1.0.g calcium-dependent protein kinase
AmTr_scaff00028.126.v1.0.g chitin elicitor receptor kinase
AmTr_scaff00038.20.v1.0.g Belongs to the 14-3-3 family
Regulatory gene
AmTr_scaff00001.432.v1.0.g Transcription factor
AmTr_scaff00001.504.v1.0.g transcription factor
AmTr_scaff00001.525.v1.0.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00062 Fatty acid elongation in mitochondria -