Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00029.28.v1.0.g
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Position
AmTr_scaff00029:337486-338211 (-)
725bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Amborella trichopoda
Also AS AT5G23280AMTR_s00029p00040760

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00045.153.v1.0.g Transcription factor
AmTr_scaff00048.5.v1.0.g BOI-related E3 ubiquitin-protein ligase
AmTr_scaff00058.25.v1.0.g LON peptidase N-terminal domain and RING finger protein
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like
Target gene
AmTr_scaff00001.171.v1.0.g thiol-disulfide oxidoreductase
AmTr_scaff00001.244.v1.0.g -
AmTr_scaff00001.297.v1.0.g Neutral ceramidase-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0042752 regulation of circadian rhythm BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043433 negative regulation of DNA-binding transcription factor activity BP
GO:0044092 negative regulation of molecular function BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051090 regulation of DNA-binding transcription factor activity BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0080090 regulation of primary metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -