Basic Information
Gene ID
AmTr_scaff00034.77.v1.0.g
Position
AmTr_scaff00034:3945268-3946559 (-)
1291bp
Gene Type
gene
Gene Description (Protein Product)
UFM1 transferase activity
Organism
Also AS AT3G46220AMTR_s00034p00207220

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00143.27.v1.0.g Ubiquitin-fold modifier 1
AmTr_scaff00049.156.v1.0.g Ufm1-specific protease
AmTr_scaff00099.94.v1.0.g Cleft lip and palate transmembrane protein
Regulatory gene
AmTr_scaff00001.525.v1.0.g transcription factor
AmTr_scaff00001.72.v1.0.g transcription factor
AmTr_scaff00003.210.v1.0.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007584 response to nutrient BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008284 positive regulation of cell population proliferation BP
GO:0009605 response to external stimulus BP
GO:0009889 regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010243 response to organonitrogen compound BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010646 regulation of cell communication BP
GO:0010720 positive regulation of cell development BP
GO:0010941 regulation of cell death BP
GO:0012505 endomembrane system CC
GO:0014013 regulation of gliogenesis BP
GO:0014015 positive regulation of gliogenesis BP
GO:0016020 membrane CC
GO:0016740 transferase activity MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0022008 neurogenesis BP
GO:0023051 regulation of signaling BP
GO:0030154 cell differentiation BP
GO:0030162 regulation of proteolysis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031396 regulation of protein ubiquitination BP
GO:0031397 negative regulation of protein ubiquitination BP
GO:0031399 regulation of protein modification process BP
GO:0031400 negative regulation of protein modification process BP
GO:0031667 response to nutrient levels BP
GO:0031984 organelle subcompartment CC
GO:0032088 negative regulation of NF-kappaB transcription factor activity BP
GO:0032092 positive regulation of protein binding BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0032880 regulation of protein localization BP
GO:0032991 protein-containing complex CC
GO:0033143 regulation of intracellular steroid hormone receptor signaling pathway BP
GO:0033146 regulation of intracellular estrogen receptor signaling pathway BP
GO:0033554 cellular response to stress BP
GO:0034976 response to endoplasmic reticulum stress BP
GO:0036211 protein modification process BP
GO:0042127 regulation of cell population proliferation BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042176 regulation of protein catabolic process BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042981 regulation of apoptotic process BP
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043066 negative regulation of apoptotic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043170 macromolecule metabolic process BP
GO:0043200 response to amino acid BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043393 regulation of protein binding BP
GO:0043412 macromolecule modification BP
GO:0043433 negative regulation of DNA-binding transcription factor activity BP
GO:0044092 negative regulation of molecular function BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050767 regulation of neurogenesis BP
GO:0050769 positive regulation of neurogenesis BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051090 regulation of DNA-binding transcription factor activity BP
GO:0051094 positive regulation of developmental process BP
GO:0051098 regulation of binding BP
GO:0051099 positive regulation of binding BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0051960 regulation of nervous system development BP
GO:0051962 positive regulation of nervous system development BP
GO:0060251 regulation of glial cell proliferation BP
GO:0060252 positive regulation of glial cell proliferation BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060284 regulation of cell development BP
GO:0060548 negative regulation of cell death BP
GO:0061136 regulation of proteasomal protein catabolic process BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071568 UFM1 transferase activity MF
GO:0071569 protein ufmylation BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0097458 obsolete neuron part CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP
GO:1902065 response to L-glutamate BP
GO:1903050 regulation of proteolysis involved in protein catabolic process BP
GO:1903320 regulation of protein modification by small protein conjugation or removal BP
GO:1903321 negative regulation of protein modification by small protein conjugation or removal BP
GO:1903362 regulation of protein catabolic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1990564 protein polyufmylation BP
GO:1990592 protein K69-linked ufmylation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000058 regulation of ubiquitin-dependent protein catabolic process BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP