Basic Information
Gene ID
AmTr_scaff00039.50.v1.0.g
Position
AmTr_scaff00039:1106037-1129009 (-)
22972bp
Gene Type
gene
Gene Description (Protein Product)
Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
Organism
Also AS AT4G02620AMTR_s00039p00093490

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00109.40.v1.0.g V-type proton ATPase subunit
AmTr_scaff00122.78.v1.0.g Belongs to the V-ATPase proteolipid subunit family
AmTr_scaff00095.107.v1.0.g V-type proton ATPase subunit
Regulatory gene
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00007.32.v1.0.g Zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -