Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00041.53.v1.0.g
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Position
AmTr_scaff00041:988103-1009649 (+)
21546bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the STXBP unc-18 SEC1 family
Organism
Amborella trichopoda
Also AS AT1G12360AMTR_s00041p00086140

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00049.23.v1.0.g Belongs to the syntaxin family
AmTr_scaff00103.72.v1.0.g Belongs to the syntaxin family
AmTr_scaff00111.115.v1.0.g Belongs to the syntaxin family
Regulatory gene
AmTr_scaff00002.310.v1.0.g lob domain-containing protein
AmTr_scaff00002.340.v1.0.g Lateral organ boundaries (LOB) domain
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC