Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00043.52.v1.0.g
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Position
AmTr_scaff00043:3316282-3325041 (+)
8759bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 1 family
Organism
Amborella trichopoda
Also AS AT5G54570AMTR_s00043p00189470

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00062.23.v1.0.g Belongs to the glycosyl hydrolase 1 family
AmTr_scaff00066.201.v1.0.g Belongs to the glycosyl hydrolase 1 family
AmTr_scaff00060.125.v1.0.g Belongs to the glycosyl hydrolase 17 family
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00010.496.v1.0.g Cyclic dof factor
AmTr_scaff00012.109.v1.0.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008422 beta-glucosidase activity MF
GO:0009505 plant-type cell wall CC
GO:0015926 glucosidase activity MF
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0030312 external encapsulating structure CC
GO:0044464 obsolete cell part CC
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901657 glycosyl compound metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00500 Starch and sucrose metabolism -
map00460 Cyanoamino acid metabolism -