Basic Information
Gene ID
AmTr_scaff00046.90.v1.0.g
Position
AmTr_scaff00046:2634663-2637163 (-)
2500bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism
Also AS AT4G16270AMTR_s00046p00166530

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00053.43.v1.0.g Belongs to the glycosyl hydrolase 9 (cellulase E) family
AmTr_scaff00048.15.v1.0.g ABC transporter B family member
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.