PPGR - Gene Detail

Gene ID	AmTr_scaff00049.238.v1.0.g View in Genome Browser
Position	AmTr_scaff00049:4103403-4111893 (+) 8490bp
Gene Type	gene
Gene Description (Protein Product)	ubiquitin binding
Organism	Amborella trichopoda
Also AS	AT4G24690AMTR_s00049p00211440

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AmTr_scaff00059.120.v1.0.g Ubiquitin-like modifier-activating enzyme atg7 AmTr_scaff00061.20.v1.0.g Peroxisome biogenesis protein AmTr_scaff00156.38.v1.0.g ubiquitin receptor
Regulatory gene	AmTr_scaff00001.525.v1.0.g transcription factor AmTr_scaff00001.72.v1.0.g transcription factor AmTr_scaff00003.210.v1.0.g Transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005768	endosome	CC
GO:0005770	late endosome	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0006914	autophagy	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016043	cellular component organization	BP
GO:0016236	macroautophagy	BP
GO:0022607	cellular component assembly	BP
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032182	ubiquitin-like protein binding	MF
GO:0034622	protein-containing complex assembly	BP
GO:0043130	ubiquitin binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0051258	protein polymerization	BP
GO:0051259	protein complex oligomerization	BP
GO:0061919	process utilizing autophagic mechanism	BP
GO:0065003	protein-containing complex assembly	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097708	intracellular vesicle	CC