Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00052.3.v1.0.g
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Position
AmTr_scaff00052:352910-353464 (+)
554bp
Gene Type
gene
Gene Description (Protein Product)
May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments
Organism
Amborella trichopoda
Also AS AT1G55190AMTR_s00052p00041770

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00155.61.v1.0.g glycolipid transfer
AmTr_scaff00111.76.v1.0.g deSI-like protein
AmTr_scaff00099.23.v1.0.g SnoaL-like domain
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP