Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00057.283.v1.0.g
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Position
AmTr_scaff00057:4424597-4431464 (-)
6867bp
Gene Type
gene
Gene Description (Protein Product)
"glycine--tRNA ligase 1
Organism
Amborella trichopoda
Also AS AT1G29880AMTR_s00057p00219540

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00111.118.v1.0.g glycine--tRNA ligase 2, chloroplastic
AmTr_scaff00209.4.v1.0.g Belongs to the class-I aminoacyl-tRNA synthetase family
AmTr_scaff00137.17.v1.0.g Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map00970 Aminoacyl-tRNA biosynthesis -