Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00059.122.v1.0.g
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Position
AmTr_scaff00059:1985356-1993328 (+)
7972bp
Gene Type
gene
Gene Description (Protein Product)
protein required for chloroplast accumulation response
Organism
Amborella trichopoda
Also AS AT1G75100AMTR_s00059p00139560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00095.70.v1.0.g Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2 ). Among the enzymes to be stimulated by the calmodulin-Ca(2 ) complex are a number of protein kinases and phosphatases
AmTr_scaff00138.19.v1.0.g THO complex subunit
AmTr_scaff00103.6.v1.0.g Belongs to the heat shock protein 70 family
Regulatory gene
AmTr_scaff00006.141.v1.0.g dof zinc finger protein
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00010.496.v1.0.g Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007015 actin filament organization BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009902 chloroplast relocation BP
GO:0009903 chloroplast avoidance movement BP
GO:0009904 chloroplast accumulation movement BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019750 chloroplast localization BP
GO:0030029 actin filament-based process BP
GO:0030036 actin cytoskeleton organization BP
GO:0031982 vesicle CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051644 plastid localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0051667 establishment of plastid localization BP
GO:0051716 cellular response to stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071483 cellular response to blue light BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097435 supramolecular fiber organization BP
GO:0098657 import into cell BP
GO:0104004 cellular response to environmental stimulus BP