Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00059.245.v1.0.g
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Position
AmTr_scaff00059:4090541-4093770 (+)
3229bp
Gene Type
gene
Gene Description (Protein Product)
-
Organism
Amborella trichopoda
Also AS AT2G15890AMTR_s00059p00211060

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00176.24.v1.0.g Adagio protein
AmTr_scaff00085.95.v1.0.g Cysteine-rich receptor-like protein kinase
AmTr_scaff00060.123.v1.0.g F-Box protein
Regulatory gene
AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters
AmTr_scaff00002.171.v1.0.g GATA transcription factor
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006935 chemotaxis BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009856 pollination BP
GO:0010154 fruit development BP
GO:0010183 pollen tube guidance BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036033 mediator complex binding MF
GO:0040011 locomotion BP
GO:0042221 response to chemical BP
GO:0042330 taxis BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044706 multi-multicellular organism process BP
GO:0044877 protein-containing complex binding MF
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0050918 positive chemotaxis BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0061458 reproductive system development BP
GO:0098542 defense response to other organism BP