Basic Information
Gene ID
AmTr_scaff00060.19.v1.0.g
Position
AmTr_scaff00060:682221-695966 (+)
13745bp
Gene Type
gene
Gene Description (Protein Product)
leucoanthocyanidin
Organism
Also AS AT1G75290AMTR_s00060p00066070

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00124.14.v1.0.g Bifunctional dihydroflavonol 4-reductase flavanone
AmTr_scaff00098.30.v1.0.g Anthocyanidin reductase
AmTr_scaff00068.158.v1.0.g Plasma membrane-associated cation-binding protein
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00941 Flavonoid biosynthesis Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.