Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00062.95.v1.0.g
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Position
AmTr_scaff00062:1481360-1492830 (+)
11470bp
Gene Type
gene
Gene Description (Protein Product)
tobamovirus multiplication protein
Organism
Amborella trichopoda
Also AS AT4G21790AMTR_s00062p00114880

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00149.15.v1.0.g tobamovirus multiplication protein
AmTr_scaff00149.23.v1.0.g tobamovirus multiplication protein
AmTr_scaff00095.3.v1.0.g Heat Stress Transcription Factor
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000325 plant-type vacuole CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0008150 biological_process BP
GO:0009705 plant-type vacuole membrane CC
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0019058 viral life cycle BP
GO:0019079 viral genome replication BP
GO:0031090 organelle membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046786 viral replication complex formation and maintenance BP
GO:0051704 obsolete multi-organism process BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC