PPGR - Gene Detail

Gene ID	AmTr_scaff00067.138.v1.0.g View in Genome Browser
Position	AmTr_scaff00067:2151804-2159210 (-) 7406bp
Gene Type	gene
Gene Description (Protein Product)	nuclear matrix protein
Organism	Amborella trichopoda
Also AS	AT5G17620AMTR_s00067p00147050

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AmTr_scaff00146.3.v1.0.g HAUS augmin-like complex subunit 2 AmTr_scaff00118.25.v1.0.g ZINC FINGER protein AmTr_scaff00079.14.v1.0.g Protein FAR1-RELATED SEQUENCE
Regulatory gene	AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6 AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like

Load All Networks

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005819	spindle	CC
GO:0005856	cytoskeleton	CC
GO:0005874	microtubule	CC
GO:0005876	spindle microtubule	CC
GO:0008017	microtubule binding	MF
GO:0008092	cytoskeletal protein binding	MF
GO:0009524	phragmoplast	CC
GO:0015630	microtubule cytoskeleton	CC
GO:0015631	tubulin binding	MF
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0051011	microtubule minus-end binding	MF
GO:0099080	supramolecular complex	CC
GO:0099081	supramolecular polymer	CC
GO:0099512	supramolecular fiber	CC
GO:0099513	polymeric cytoskeletal fiber	CC