Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00067.182.v1.0.g
View in Genome Browser
Position
AmTr_scaff00067:2943192-2948532 (+)
5340bp
Gene Type
gene
Gene Description (Protein Product)
catalytic activity
Organism
Amborella trichopoda
Also AS AT3G16190AMTR_s00067p00177560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00108.5.v1.0.g Ribosomal RNA small subunit methyltransferase
AmTr_scaff00121.35.v1.0.g adenylyltransferase
AmTr_scaff00174.29.v1.0.g quinolinate synthase
Regulatory gene
AmTr_scaff00001.192.v1.0.g NAC transcription factor
AmTr_scaff00001.280.v1.0.g NAC domain-containing protein
AmTr_scaff00002.637.v1.0.g tesmin tso1-like cxc

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006206 pyrimidine nucleobase metabolic process BP
GO:0006208 pyrimidine nucleobase catabolic process BP
GO:0006212 uracil catabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009112 nucleobase metabolic process BP
GO:0009987 cellular process BP
GO:0017144 xenobiotic metabolic process BP
GO:0019860 uracil metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042737 xenobiotic catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046113 nucleobase catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0072527 pyrimidine-containing compound metabolic process BP
GO:0072529 pyrimidine-containing compound catabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP