Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00067.87.v1.0.g
View in Genome Browser
Position
AmTr_scaff00067:1354349-1362052 (+)
7703bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Organism
Amborella trichopoda
Also AS AT4G21270AMTR_s00067p00108200

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00182.18.v1.0.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
AmTr_scaff00121.24.v1.0.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
AmTr_scaff00153.2.v1.0.g serine threonine-protein kinase BUB1
Regulatory gene
AmTr_scaff00002.637.v1.0.g tesmin tso1-like cxc
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003774 cytoskeletal motor activity MF
GO:0003777 microtubule motor activity MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005856 cytoskeleton CC
GO:0005871 kinesin complex CC
GO:0005875 microtubule associated complex CC
GO:0006810 transport BP
GO:0006928 obsolete movement of cell or subcellular component BP
GO:0007017 microtubule-based process BP
GO:0007018 microtubule-based movement BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008574 plus-end-directed microtubule motor activity MF
GO:0009524 phragmoplast CC
GO:0009987 cellular process BP
GO:0010970 transport along microtubule BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0030705 cytoskeleton-dependent intracellular transport BP
GO:0032991 protein-containing complex CC
GO:0042623 ATP hydrolysis activity MF
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0047496 vesicle transport along microtubule BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051656 establishment of organelle localization BP
GO:0072384 organelle transport along microtubule BP
GO:0099111 microtubule-based transport BP
GO:0099518 vesicle cytoskeletal trafficking BP
GO:1990939 microtubule motor activity MF
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.